PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 73196
Common NameHY5A-2, SELMODRAFT_451326
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
Family bZIP
Protein Properties Length: 53aa    MW: 6373.26 Da    PI: 10.158
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
73196genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.43.2e-13351957
            CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  bZIP_1  9 rkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57
            r+ +NR++A+  R+RKka++ eLe+k+k Le+ N +L +++ +l+ e +
   73196  3 RLLRNRVSAQQARERKKAYLVELEQKAKDLETRNAELEEKNATLQRENY 51
            899***************************************9998865 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5021710.887153IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-15253No hitNo description
SuperFamilySSF579592.56E-12253No hitNo description
PfamPF001702.8E-11351IPR004827Basic-leucine zipper domain
PROSITE patternPS000360317IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 53 aa     Download sequence    Send to blast
LNRLLRNRVS AQQARERKKA YLVELEQKAK DLETRNAELE EKNATLQREN YML
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002985256.11e-27hypothetical protein SELMODRAFT_451326
SwissprotQ9SM502e-20HY5_SOLLC; Transcription factor HY5
TrEMBLD8SPA72e-27D8SPA7_SELML; Putative uncharacterized protein HY5A-2
STRINGEFJ137504e-27(Selaginella moellendorffii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP20811737
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.11e-20bZIP family protein
Publications ? help Back to Top
  1. Banks JA, et al.
    The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
    Science, 2011. 332(6032): p. 960-3
    [PMID:21551031]